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Advanced Materials https://doi.org/10.1002/adma.202308837
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(143) “Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane”
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Nat Struct Mol Biol 30, 1695–1706 https://doi.org/10.1038/s41594-023-01111-7
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Molecules and Cells 46(2): 71–73 https://doi.org/10.14348/molcells.2023.2197
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(137) “Structural insights into ClpP protease side exit pore‐opening by a pH drop coupled with substrate hydrolysis”
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Journal of Hepatology. ISSN 0168-8278. https://doi.org/10.1016/j.jhep.2022.03.034
(136) “LAG-3xPD-L1 bispecific antibody potentiates antitumor responses of T cells through dendritic cell activation” </a>
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Molecular Therapy 30 (8), 2800-2816. https://doi.org/10.1016/j.ymthe.2022.05.003
(136) “One-pot conversion of engineered poplar into biochemicals and biofuels using biocompatible deep eutectic solvents” </a>
Kwang Ho Kim, Yaseen Mottiar, Keunhong Jeong, Phuong Hoang Nguyen Tran, Ngoc Tuan Tran, Jingshun Zhuang, Chang Soo Kim, Hyunjoo Lee, Gyeongtaek Gong, Ja Kyong Ko, Sun-Mi Lee, So Young Kim, Ji Yeon Shin, Hanseob Jeong, Hyun Kyu Song, Chang Geun Yoo, Nak-Kyoon Kim, Shawn D Mansfield. (2022)
Green Chemistry 24 (23), 9055-9068 DOI: 10.1039/D2GC02774G
(136) “Potential of colostrum-derived exosomes for promoting hair regeneration through the transition from telogen to anagen phase” </a>
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(135) “LC3B is an RNA-binding protein to trigger rapid mRNA degradation during autophagy” </a>
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Nature Communications. Vol. 13, 1436, Pages 1-17. https://doi.org/10.1038/s41467-022-29139-1
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Jin Seok Shin, Si Hoon Park, Leehyeon Kim, Jiwon Heo, Hyun Kyu Song. (2021)
Biochem Biophys Res Commun. Volume 582, 10, Pages 86-92. https://doi.org/10.1016/j.bbrc.2021.10.007
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(132) “Translation mediated by the nuclear cap-binding complex is confined to the perinuclear region via a CTIF–DDX19B interaction”
Yeonkyoung Park, Joori Park, Hyun Jung Hwang, Leehyeon Kim, Kwon Jeong, Hyun Kyu Song, Simone C Rufener, Oliver Mühlemann, Yoon Ki Kim. (2021)
Nucleic Acids Research. Volume 49, Issue 14, Pages 8261–8276.
(131) “Phospholipid transfer function of PTPIP51 at mitochondria-associated ER membranes”
Hyun Ku Yeo, Tae Hyun Park, Hee Yeon Kim, Hyonchol Jang, Jueun Lee, Geum-Sook Hwang, Seong Eon Ryu, Si Hoon Park, Hyun Kyu Song, Hyun Seung Ban, Hye-Jin Yoon, Byung Il Lee. (2021)
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Min Ji Yoon, Boyoon Choi, Eun Jin Kim, Jiyeon Ohk, Chansik Yang, Yeon-Gil Choi, Jinyoung Lee, Chanhee Kang, Hyun Kyu Song, Yoon Ki Kim, Jae-Sung Woo, Yongcheol Cho, Eui-Ju Choi, Hosung Jung & Chungho Kim. (2021)
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(128) “Structural basis for the N-degron specificity of ClpS1 from Arabidopsis thaliana”
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Protein Science. 30, 3, 700-708. https://doi.org/10.1002/pro.4018
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Sang-Won Park, Pureum Jeon, Akinori Yamasaki, Hye Eun Lee, Ji Young Mun, Yong-Woo Jun, Ju-Hui Park, Seung-Hwan Lee, Soo-Kyeong Lee, Hyun Kyu Song, You-Kyung Lee, Michael Lazarou, Dong-Hyung Cho, Masaaki Komatsu, Nobuo Noda, Deok-Jin Jang, Jin-A Lee. (2021)
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(126) “Tyrosyltyrosylcysteine-Directed Synthesis of Chiral Cobalt Oxide Nanoparticles and Peptide Conformation Analysis”
Hyeohn Kim, Kyeong-Mi Bang, Heonjin Ha, Nam Heon Cho, Seok Daniel Namgung, Sang Won Im, Kang Hee Cho, Ryeong Myeong Kim, Won Il Choi, Yae-Chan Lim, Ji-Yeon Shin, Hyun Kyu Song, Nak-Kyoon Kim, Ki Tae Nam. (2020)
ACS nano. 15, 1, 979–988. https://doi.org/10.1021/acsnano.0c07655
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Crystals. 10, 821. https://doi.org/10.3390/cryst10090821
(124) “Targeted Degradation of Transcription Coactivator SRC-1 through the N-Degron Pathway”
Yeongju Lee, Jiwon Heo, Hoibin Jeong, Kyung Tae Hong, Do Hoon Kwon, Min Hyeon Shin, Misook Oh, Ganesh A. Sable, G. One Ahn, Jun Seok Lee, Hyun Kyu Song, Hyun Suk Lim. (2020)
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(123) “TRAF6-mediated ubiquitination of MST1/STK4 attenuates the TLR4-NF-κB signaling pathway in macrophages”
Kyung Hye Roh, Yeojin Lee, Je Hyun Yoon, Danbi Lee, Eunju Kim, Eunchong Park, In Young Lee, Tae Sung Kim, Hyun Kyu Song, Jaekyoon Shin, Dae Sik Lim, Eui Ju Choi. (2020)
Cell. Mol. Life Sci. https://doi.org/10.1007/s00018-020-03650-4
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Leehyeon Kim, Do Hoon Kwon, Jiwon Heo, Mi Rae Park, Hyun Kyu Song. (2020)
J. Biol. Chem. 295 (9) , pp. 2590-2600. doi:10.1074/jbc.RA119.010912
(121) “Metabolic engineering of Escherichia coli to produce a monophosphoryl lipid A adjuvant”
Yuhyun Ji, Jinsu An, Dohyeon Hwang, Da Hui Ha, Sang Min Lim, Chankyu Lee, Jinshi Zhao, Hyun Kyu Song, Eun Gyeong Yang, Pei Zhou, Hak Suk Chung. (2020)
Metab Eng. Volume 57, pp. 193-202. https://doi.org/10.1016/j.ymben.2019.11.009
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(120) “A host dTMP-bound structure of T4 phage dCMP hydroxymethylase mutant using an X-ray free electron laser”
Si Hoon Park, Jaehyun Park, Sang Jae Lee, Woo Seok Yang, Sehan Park, Kyungdo Kim, Zee-Yong Park & Hyun Kyu Song. (2019)
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(119) “Structural and Mechanistic Insightsinto Caffeine Degradation by theBacterialN-Demethylase ComplexJun”
Jun Hoe Kim, Bong Heon Kim, Shelby Brooks, Seung Yeon Kang, Ryan M.Summers, Hyun Kyu Song (2019)
Jounal of Molecular Biology. Volume 431, Issue 19, 6 Sep 2019, Pages 3647-3661. https://doi.org/10.1016/j.jmb.2019.08.004
(118) “Endoribonucleolytic Cleavage of m6A-ContainingRNAs by RNase P/MRP Complex”
Ok Hyun Park, Hongseok Ha, Yujin Lee, Sung Ho Boo, Do Hoon Kwon, Hyun Kyu Song, Yoon Ki Kim (2019)
Mol Cell. Volume 74, Issue 3, 2 May 2019, Pages 494-507.e8
(117) “MST1 Negatively Regulates TNFα-Induced NF-κB Signaling through Modulating LUBAC Activity”
In Young Lee, Jane Melissa Lim, Hyunchu Cho, Eunju Kim, Yeonsil Kim, Hye-Kyung Oh, Woo Seok Yang, Kyung-Hye Roh, Hyun Woo Park, Jung-Soon Mo, Je-Hyun Yoon, Hyun KyuSong, Eui-Ju Choi (2019)
Mol Cell. Mar 21;73(6):1138-1149.e6
(116) “A cytosine modification mechanism revealed by the structure of a ternary complex of deoxycytidylate hydroxymethylase from bacteriophage T4 with its cofactor and substrate”
Si Hoon Park, Se Won Suh and Hyun Kyu Song (2019)
IUCrJ. Jan 24;6(Pt 2):206-217
(115) “eIF4A3 Phosphorylation by CDKs Affects NMD during the Cell Cycle”
Incheol Ryu, You-Sub Won, Hongseok Ha, Eunjin Kim, Yeonkyoung Park, Min Kyung Kim, Do Hoon Kwon, Junho Choe, Hyun Kyu Song, Hosung Jung, and Yoon Ki Kim. (2019)
Cell Reports. Volume 26, Issue 8, 19 February 2019, Pages 2126-2139.e9
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Do Hoon Kwon, Leehyeon Kim, Hyun Kyu Song (2018)
Autophagy. Jan;15(1):180-181
2018
(113) “Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter”
Do Hoon Kwon, Ok Hyun Park, Leehyeon Kim, Yang Ouk Jung, Yeonkyoung Park, Hyeongseop Jeong, Jaekyung Hyun, Yoon Ki Kim, Hyun Kyu Song (2018)
Nature communications. 9, Article number: 3291
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Byeong-Won Kim, Yunjung Jin, Jiyea Kim, Jun Hoe Kim, Juneyoung Jung, Seongman Kang, Ick Young Kim, Joungmok Kim, Heesun Cheong, Hyun Kyu Song (2018)
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(111) “PELI1 Selectively Targets Kinase-Active RIP3 for Ubiquitylation-Dependent Proteasomal Degradation”
Seung-Won Choi, Han-Hee Park, Soyeon Kim, Jee Min Chung, Hyun-Jin Noh, Sue Kyung Kim, Hyun Kyu Song, Chang-Woo Lee Michael J.Morgan, Ho Chul Kang, You-Sun Kim (2018)
Molecular Cell. Volume 70, Issue 5, 7 June 2018, Pages 920-935.e7
(110) “Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila”
Leehyeon Kim, Do Hoon Kwon, Bong Heon Kim, Jiyeon Kim, Mi Rae Park, Zee-Yong Park, Hyun Kyu Song (2018)
Jounal of Molecular Biology. Volume 430, Issue 17, 17 August 2018, Pages 2843-2856
(109) “Unveiling the pathway to Z-DNA in the protein-induced B–Z transition”
Sook Ho Kim, So-Hee Lim, Ae-Ree Lee, Do Hoon Kwon, Hyun Kyu Song, Joon-Hwa Lee, Minhaeng Cho, Albert Johner, Nam-Kyung Lee, Seok-Cheol Hong (2018)
Nucleic Acids Research. Volume 46, Issue 8, 4 May 2018, Pages 4129–4137
(108) “A Structural View of Xenophagy, a Battle between Host and Microbes”
Do Hoon Kwon, and Hyun Kyu Song (2018)
Molelcular and Cells. 41(1): 27-34
2017
(107) “Structural Characterization of RNA Recognition Motif-2 Domain of SART3”
Bang, K. M., Cho, N. Y., Kim, W. J., Kim, A. R., Song, H. K., Kim, E. E. K. & Kim, N. K. (2017)
Bulletin of the Korean Chemical Society. 38, 4, p. 444-447 4 p.
(106) “A novel conformation of the LC3-interacting region motif revealed by the structure of a complex between LC3B and RavZ”
Do Hoon Kwon, Leehyeon Kim, Byeong-Won Kim, Jun Hoe Kim, Kyung-Hye Roh, Eui-Ju Choi, Hyun Kyu Song (2017)
Biochemical and Biophysical Research Communications. 490(3) 1093-1099
(105) “Structure determination of the C-terminal fragment of yeast Ski7 using twinned crystal data”
Si Hoon Park, Yong-Boo Kuk, Ji-Young Lee, Byeong-Cheon Jeong, Hyun Kyu Song (2017)
BioDesign. 5 1 12-23
(104) “ACCORD: an assessment tool to determine the orientation of homodimeric coiled-coils”
Byeong-Won Kim, Yang Ouk Jung, Min Kyung Kim, Do Hoon Kwon, Si Hoon Park, Jun Hoe Kim, Yong-Boo Kuk, Sun-Joo Oh, Leehyeon Kim, Bong Heon Kim, Woo Seok Yang & Hyun Kyu Song (2017)
Scientific Reports. 7
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(103) “The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane”
Do Hoon Kwon, Sulhee Kim, Yang Ouk Jung, Kyung-Hye Roh, Leehyeon Kim, Byeong-Won Kim, Seung Beom Hong, In Young Lee, Ju Han Song, Woo Cheol Lee, Eui-Ju Choi, Kwang Yeon Hwang, Hyun Kyu Song (2016)
Autophagy. 13 1 70-81
(102) “The structure of the pleiotropic transcription regulator CodY provides insight into its GTP-sensing mechanism”
Ah-reum Han, Hye-Ri Kang, Jonghyeon Son, Do Hoon Kwon, Sulhee Kim, Woo Cheol Lee, Hyun Kyu Song, Moon Jung Song, Kwang Yeon Hwang (2016)
Nucleic acids res. 44 19 9483-9493
(101) “Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway”
Min Kyung Kim, Sun Joo Oh, Byung-Gil Lee, Hyun Kyu Song (2016)
Proc Natl Acad Sci USA. 201612620
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Hwang, D., Kim, S. A., Yang, E. G., Song, H. K. & Chung, H. S. (2016)
Protein Expr Purif. 126 104-108
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Klionsky, D. J. et al. & Song, H. K. (2016)
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Kim, B. -W., Kwon D. H. & Song, H. K. (2016)
BMB Rep. 49 73-80
2015
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Cha, M. Y., Cho, H. J., Kim, C., Jung, Y. O., Kang, M. J., Murray, M. E., Hong, H. S., Choi, H., Kim, D. K., Choi, H., Kim, J., Dickson, D. W., Song, H. K., Cho, J. W., Yi, E. C., Kim, J., Jin, S. M. & Inhee, M. J. (2015)
Hum Mol Genet. 24 6492-6504
(96) “PEA-15 facilitates EGFR dephosphorylation via ERK sequestration at increased ER-PM contracts in TNBC cells”
Shin, M. Y., Lee, K. E., Yang, E. G., Jeon, H. S. & Song, H. K. (2015)
FEBS Lett. 589 1033-1039
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Kim, J. H. & Song, H. K. (2015)
BMB reports. 48 129-130
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Yeom, J., Kang, M. J., Shin, D., Song, H. K., Lee, C. & Lee, J. E. (2015)
Analytical biochemistry. 477 41-49
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Kang, A. R., Park, S. H., Lee, S., Choi, D. Y., Kim, K. P., Song, H. K., Hong, S. & Kang, S. (2015)
Biochimica et biophysica acta. 1854 356-364
(92) “Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners”
Kim, J. H., Hong, S. B., Lee, J. K., Han, S., Roh, K. H., Lee, K. E., Kim, Y. K., Choi, E. J. & Song, H. K. (2015)
Autophagy. 11 75-87
(91) “Insulin activates EGFR by stimulating its interaction with IGF-1R in low-EGFR-expressing TNBC cells”
Shin, M.Y., Yang, E. G., Song, H. K., Jeon, H. S.(2015)
BMB Reports. 48 342-347
2014
(90) “eIF4AIII enhances translation of nuclear cap-binding complex-bound mRNAs by promoting disruption of secondary structures in 5’UTR”
Choe, J., Ryu, I., Park, O. H., Park, J., Cho, H., Yoo, J. S., Chi, S. W., Kim, M. K., Song, H. K. & Kim, Y. K. (2014)
Proc Natl Acad Sci USA. 43, e4577-86
(89) “Direct recognition of the C-terminal polylysine residues of nonstop protein by Ltn1, an E3 ubiquitin ligase”
Sung K. H., Song, H. K. (2014)
Biochem Biophys Res Commun. 453, 642-647
(88) “Crystallization and preliminary X-ray analysis of the C-terminal fragment of Ski7 from Saccharomyces cerevisiae”
Lee, J. Y., Park, S. H., Jeong, B. C. & Song, H. K. (2014)
Acta crystallographica. Section F, Structural biology communications. 70, 1252-1255
(87) “Insights into the Molecular Evolution of HslU ATPase through Biochemical and Mutational analyses”
Sung K. H., Song, H. K. (2014)
PLoS One. 20, e103027
(86) “Expansion of the clinicopathological and mutational spectrum of Perry syndrome”
Chung E. J., Hwang J. H., Lee M. J., Hong J. H., Ji K. H., Yoo W. K., Kim S. J., Song, H. K., Lee C. S., Lee M. S., Kim J. Y. (2014)
Parkinsonism Relat Disord. 9, 388-393
2013
(85) “In vivo fluorescence imaging for cancer diagnosis using receptor-targeted epidermal growth factor-based nanoprobe”
Ryu J. H., Shin, M. Kim, S. A., Lee, S., Kim, H., Koo, H., Kim, B. S., Song, H. K., Kim, S. H., Choi, K., Kwon, I. C., Jeon H., & Kim, K. (2013)
Biomaterials. 34, 9149-9159
(84) “MG53-induced IRS-1 ubiquitination negatively regulates skeletal myogenesis and insulin signalling”
Yi, J. S., Park, J. S., Ham, Y. M., Nguyen N, Lee, N. R., Hong, J.,Kim, H. W., Lee, H., Lee, C. S., Jeong, B. C., Song, H. K. & Ma J, Ko, Y. K. (2013)
Nature Commun. 4, 2354
(83) “Structural and biochemiacal analyses of the eukaryotic heat shock locus V(HslV) from Trypanosoma brucei”
Sung, K. H., Lee, S. Y. & Song, H. K. (2013)
J Biol Chem 288, 23234-23243
(82) “Change in single cystathionine beta-synthase domain-containing protein from a bent to flat conformation upon adenosine monophosphate binding”
Jeong, B. C., Park, S.H., Yoo, K. S. & Shin, J. S., Song, H. K. (2013)
J Struct Biol. 183, 40-46
(81) “Structural basis for recognition of autophagic receptor NDP52 by the sugar receptor galectine-8”
Kim, B. -W., Hong, S. B., Kim, J. H., Kwon, D. H. & Song, H. K. (2013)
Nature Commun. 4, 1613
(80) “Rapid degradation of replication-dependent histone mRNAs largely occurs on mRNAs bound by nuclear cap-binding proteins 80 and 20”
Choe, J., Kim, K. M., Park, S., Lee, Y. K., Song, O. K., Kim, M. K., Lee, B. G., Song, H. K. & Kim, Y. K. (2013)
Nucleic Acids Res. 41, 1307-1318
(79) “Crystal structure of the single cystathionine beta-synthase domain-containing protein CBSX1 from Arabidopsis thaliana”
Jeong, B. C., Park, S.H., Yoo, K. S. & Shin, J. S., Song, H. K. (2013)
Biochem Biophys Res Commun. 430, 265-271
2012
(78) “Structure of the ribosome-inactivating protein from barley seeds reveal a unique activation mechanism”
Lee, B.-G., Kim, M. K., Kim, B. -W. & Suh, S. W., Song, H. K. (2012)
Acta Crystallogr. D68, 1488
(77) “Structure of the autophagic E2 enzyme Atg10”
Hong, S. B., Kim, B. -W., Kim, J. H. & Song, H. K. (2012)
Acta Crystallogr. D68, 1409
(76) “Crystal structure of pyrococcus furiosus PF2050, a member of the DUF2666 protein family”
Han, B. G., Jeong, J. C., Cho, J. W, C., Jeong B. C., Song, H. K, Lee, J. Y. & Lee, B. I. (2012)
Febs Lett. 586, 1384
(75) “Backbone resonances assignment of 19kDa domain of human mitotic checkpoint serine/threonine-protein kinase, Bub1”
Park, S. J., Kim, H. H., Jung, Y. S., Kang, S. J., Cheong, H. K., Song, H. K. & Lee, B. J. (2012)
Biomolecular NMR Assignments 6, 109
2011
(74) “Structural insights into the conformational diversity of ClpP from Bacillus subtilis”
Lee, B.-G., Kim, M. K. & Song, H. K. (2011)
Mol. Cells 32, 589
(73) “Insights into non-canonical E1 enzyme activation revealed by the autophagic E1 Atg7 in complex with Atg8”
Hong, S. B. et al. & Song, H. K. (2011)
Nature Struct. Mol. Biol. 18, 1323
(72) “Single cystathionine beta-synthase domain-containing proteins modulate development by regulating the thioredoxin system in Arabidopsis”
Yoo, K. S., Ok, S. H., Jeong, B. C., Jung, K. W., Cui, M. H., Hyoung, S., Lee, M. R. & Song, H. K., Shin, J. S. (2011)
Plant cell 23, 3577-3594.
(71) “Ubiquitin ligases of the N-end rule pathway: assessment of mutations in UBR1 That cause the Johanson-Blizzard syndrome”
Hwang, C. S., Sukalo, M., Batygin, O., Addor, M. C., Brunner, H., Aytes, A. P., Mayerle, J., Song H. K., Varshavsky, A. & Zenker, M. (2011)
PLoS One 6, e24925. (PLOS.org)
(70) “Crystal structure of a coiled-coil domain from human ROCK I”
Tu, D., Li, Y., Song, H. K., Toms, A. V., Gould, C. J., Ficarro, S. B., Marto, J. A., Goode, B. L. & Eck, M. J. (2011)
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(69) “Crystal structure of ubiquitin-like small archaeal modifier protein 1 (SAMP1) from Haloferax volcanii”
Jeong, Y. J., Jeong, B.-C. & Song, H. K. (2011)
Biochem. Biophys. Res. Commun. 405, 112-117. (Elsevier Inc.)
2010
(68) “Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases”
Choi, W. S., Jeong, B.-C., Joo, Y. J., Lee, M.-R., Kim, J., Eck, M. J. & Song, H. K. (2010)
Nature Struct. Mol. Biol. 17, 1175-1181. (Nature Publishing Group)
[News & Views by Nature Struct. Mol. Biol.]
(67) “Dab1 binds to Fe65 and diminishes the effect of Fe65 or LRP1 on APP processing”
Kwon, O. Y., Hwang, K., Kim, J.-A., Kim, K., Kwon, I. C., Song, H. K. & Jeon, H. (2010)
J. Cell. Biochem. 111, 508-519. (Wiley-Interscience)
(66) “Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism”
Lee, B.-G., Park, E. Y., Lee, K.-E., Jeon, H., Sung, K. H., Paulsen, H., Rubsamen-Schaeff, H., Brotz-Oesterhelt, H. & Song, H. K. (2010)
Nature Struct. Mol. Biol. 17, 471-478. (Nature Publishing Group)
(65) “Expression, purification and biochemical characterization of the N-terminal regions of human TIG3 and HRASLS3 proteins”
Han, B. G., Cho, J. W., Cho, Y. D., Kim, S. Y., Yoon, H. J., Song, H. K., Cheong, H. K., Jeon, Y. H. Lee, D. K., Lee, S. & Lee, B. I. (2010)
Protein Expr. Purif. 71, 103-107. (Elsevier Inc.)
(64) “Crystal structure of PRY-SPRY domain of human TRIM72”
Park, E. Y., Kwon, O.-B., Jeong, B.-C., Yi, J. S., Lee, C. S., Ko, Y. G. & Song, H. K. (2010)
Proteins: Structure, Function and Bioinformatics 78, 790-795. (Wiley Interscience)
2009
(63) “A simple technique to convert sitting-drop vapor diffusion into hanging-drop vapor diffusion by solidifying the reservoir solution with agarose”
Whon, T. W., Lee, Y.-H., Lee, D.-S., Ah, Song, H. K. & Kim, S.-G. (2009)
J. Applied Crystallogr. 42, 975-976. (International Union of Crystallography)
(62) “Biochemical and structural characterization of 5’-methylthioadenosine nucleosidases from Arabidopsis thaliana”
Park, E. Y., Choi, W. S., Oh, S. I., Kim, K. N., Shin, J. S. & Song, H. K. (2009)
Biochem. Biophys. Res. Commun. 381, 619-924. (Elsevier Inc.)
(61) “Identification of a novel ubiquitin binding site of STAM1 VHS domain by NMR spectroscopy”
Hong, Y. H., Ahn, H. C., Lim, J., Kim, H. M., Ji, H. Y., Lee, S., Kim, J. H., Park, E. Y., Song, H. K. & Lee, B. J. (2009)
FEBS Lett. 583, 287-292. (Federation of European Biochemical Societies)
2008
(60) “Real-time imaging of NF-AT nucleocytoplasmic shuttling with a photoswitchable fluorescence protein in live cells”
Kwon, O. Y., Kwon, I. C., Song, H. K. & Jeon, H. (2008)
Biochimica et Biophysica Acta 1780, 1403-1407. (Elsevier Inc.)
(59) “Purification, crystallization and prelinimary X-ray diffraction analysis of a cystathionine beta-synthase domain-containing protein, CDCP2 from Arabidopsis thaliana”
Jeong, B.-C., Yoo, K. S., Jung, K. W., Shin, J. S. & Song, H. K. (2008)
Acta Crystallogr. F64, 825-827. (International Union of Crystallography)
(58) “A role for a menthone reductase in resistance against microbial pathogens in plants”
Choi, H. W., Lee, B. G., Kim, N. H., Park, Y., Lim, C. W., Song, H. K. & Hwang, B. K. (2008)
Plant Physiology 148, 383-401. (American Society for Plant Biologists)
(57) “A degradation signal recognition in prokaryotes”
Park, E. Y. & Song, H. K. (2008)
J. Synchrotron Rad. 15, 246-249. (International Union of Crystallography)
2007
(56) “Structural and functional insights into dom34, a key component of no-go mRNA decay”
Lee, H. H., Kim, Y. S., Kim, K. H., Heo, I., Kim, S. K., Kim, O., Kim, H. K., Yoon, J. Y., Kim, H. S., Kim, D. J., Lee, S. J., Yoon, H. J., Kim, S. J., Lee, B.-G., Song, H. K., Kim, V. N., Park, C. M. & Suh, S. W. (2007)
Molecular Cell 27, 938-950. (Cell Press)
(55) “Tumoral acidic extracellular pH targeting of pH-responsive MPEG-poly(beta-amino ester) block copolymer micelles for cancer therapy”
Ko, J., Park. K., Kim, Y. S., Kim, M. S., Han, J. K., Kim, K., Park, R. W., Kim, I. S., Song, H. K., Lee, D. S. & Kwon, I. C. (2007)
J. Control. Release 123, 109-115. (Elsevier Inc.)
(54) “The recombination-associated protein RdgC adopts a novel toroidal architecture for DNA binding”
Ha, J. Y., Kim, H. K., Kim, D. J., Kim, K. H., Oh, S. J., Lee, H. H., Yoon, H. J., Song, H. K. & Suh, S. W. (2007)
Nucleic Acids Res. 35, 2671-2681. (Oxford University Press)
(53) “Structural basis of SspB-tail recognition by the zinc binding domain of ClpX”
Park, E. Y., Lee, B. G., Hong, S. B., Kim, H. W., Jeon, H. & Song, H. K. (2007)
J. Mol. Biol. 367, 514-526. (Academic Press) [Cover Illustration of Mar. 23rd Issue]
(52) “Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S”
Nam, K. H., Kwon, O. Y., Sugiyama, K., Lee, W. H., Kim, Y. K., Song, H. K., Kim, E. E., Park, S. Y., Jeon, H. & Hwang, K. Y. (2007)
Biochem. Biophys. Res. Commun. 354, 962-967. (Elsevier Inc.)
2006
(51) “STAM-AMSH interaction facilitates the deubiquitination activity in the C-terminal AMSH”
Kim, M. S., Kim, J. A., Song, H. K. & Jeon, H. (2006)
Biochem. Biophys. Res. Commun. 351, 612-618. (Elsevier Inc.)
[Corresponding authors]
(50) “Crystal structure of 5’-methylthioadenosine nucleosidase from Arabidopsis thaliana at 1.5 A resolution”
Park, E. Y., Oh, S. I., Nam, M. J., Shin, J. S., Kim, K. N. & Song, H. K. (2006)
Proteins: Structure, Function and Bioinformatics 65, 519-523. (Wiley InterScience)
(49) “Crystal structure of the FERM domain of focal adhesion kinase”
Ceccarelli, D. F., Song, H. K., Poy, F., Schaller, M. D. & Eck, M. J. (2006)
J. Biol. Chem. 281, 252-259. (American Society for Biochemistry and Molecular Biology)
2005
(48) “Characterization of the HslU chaperone affinity for HslV protease”
Azim, M. K., Goehring, W., Song, H. K., Ramachandran, R., Bochtler, M. & Goettig, P. (2005)
Protein Sci. 14, 1357-1362. (Protein Society)
(47) “An ssrA-tagging system”
Song, H. K. (2005)
Biochemistry News 25, 35-41. (Korean Society for Biochemistry and Molecular Biology)
2004
(46) “Crystal structure of the Bowman-Birk inhibitor from barley seeds in ternary complex with porcine trypsin”
Park, E. Y., Kim, J.-A., Kim, H.-W., Kim, Y. S. & Song, H. K. (2004)
J. Mol. Biol. 343, 173-186. (Academic Press)
[Cover Illustration of Oct. 8th Issue]
(45) “Ring-shaped architecture of RecR: implications for its role in homologous recombinational DNA repair”
Lee, B. I., Kim, K. H., Park, S. J., Eom, S. H., Song, H. K. & Suh, S. W. (2004)
EMBO J. 23, 2029-2038. (Nature Publishing Group)
2003
(44) “Proteomics-based target identification: Bengamide is a new class of methionine aminopeptidase inhibitors”
Towbin, H., Bair, K. W., DeCaprio, J. A., Eck, M. J., Kim, S., Kinder, F. R., Morollo, A., Mueller, D. R., Schindler, P., Song, H. K., van Oostrum, J., Versace, R. W., Voshol, H., Wood, J., Zabludoff, S., & Phillips, P. E. (2003)
J. Biol. Chem. 278, 52964-52971. (American Society for Biochemistry and Molecular Biology)
(43) “Structural basis of degradation signal recognition by SspB, a specificity-enhancing factor for the ClpXP proteolytic machine”
Song, H. K. & Eck, M. J. (2003)
Molecular Cell 12, 75-86. (Cell Press)
[News & Views by Nature Struct. Mol. Biol.]
(42) “Origins of peptide selectivity and phosphoinositide binding revealed by structures of disabled-1 PTB domain complexes”
Stolt, P. C., Jeon, H., Song, H. K., Herz, J., Eck, M. J. & Blacklow, S. C. (2003)
Structure 11, 569-579. (Cell Press)
(41) “Homotetrameric structure of the SNAP-23 N-terminal coiled-coil domain”
Freedman, S. J., Song, H. K., Xu, Y., Sun, Z. Y. & Eck, M. J. (2003)
J. Biol. Chem. 278, 13462-12467. (American Society for Biochemistry and Molecular Biology)
(40) “SAP couples Fyn to SLAM immune receptors”
Chan, B., Lanyi, A., Song, H. K., Griesbach, M., Simarro-Grande, M., Poy, F., Howie, D., Sumegi, J., Terhorst, C. & Eck, M. J. (2003)
Nature Cell Biol. 5, 155-160. (Nature Publishing Group)
[Co-first authors]
(39) “Isolation and characterization of the prokaryotic proteasome homolog HslVU (ClpQY) from Thermotoga maritima and the crystal structure of HslV”
Song, H. K., Bochtler, M., Azim, M. K., Hartmann, C., Huber, R. & Ramachandran, R. (2003)
Biophysical Chemistry 100, 437-452. (Elsevier Science)
[Dedication to the memory of Prof. John T. Edsall]
2002
(38) “Functional interactions of HslV (ClpQ) with the ATPase HslU (ClpY)”
Ramachandran, R., Hartmann, C., Song, H. K., Huber, R. & Bochtler, M. (2002)
Proc Natl Acad Sci USA. 99, 7396-7401. (National Academy of Sciences, USA)
(37) “Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor”
Min, K., Song, H. K., Chang, C., Kim, S. Y., Lee, K.-J. & Suh, S. W. (2002)
Proteins 46, 340-342. (Wiley-Liss, Inc.)
2001
(36) “Crystal structure of Klebsiella aerogenes UreE, a nickel-binding metallochaperone for urease activation”
Song, H. K., Mulrooney, S. B., Huber, R. & Hausinger, R. P.* (2001)
J. Biol. Chem. 276, 49359-49364. (American Society of Biochemistry and Molecular Biology)
[* Corresponding authors]
(35) “The quaternary arrangement of HslU and HslV in a cocrystal: A response to Wang, Yale”
Bochtler, M., Song, H. K., Hartmann, C., Ramachandran, R. & Huber, R. (2001)
J. Struct. Biol. 135, 281-293. (Academic Press)
(34) “Structural basis of non-specific lipid binding in maize lipid transfer protein complexes revealed by high-resolution X-ray crystallography”
SHan, G. W., Lee, J. Y., Song, H. K., Chang, C., Min, K., Moon, J., Shin, D. H., Kim, D. H., Choi, J. W., Lim, D., Moon, J. & Suh, S. W. (2001)
J. Mol. Biol. 308, 263-278. (Academic Press)
2000
(33) “Mutational studies on HslU and its docking mode with HslV”
Song, H. K., Hartmann, C., Ramachandran, R., Bochtler, M., Behrendt, R., Moroder, L. & Huber, R. (2000)
Proc Natl Acad Sci USA. 97, 14103-14108. (National Academy of Sciences, USA)
(32) “Docking of components in a bacterial complex - Reply”
Bochtler, M., Hartmann, C., Song, H. K., Ramachandran, R. & Huber, R (2000)
Nature 408, 668. (Nature Publishing Group)
(31) “Nucleoside diphosphate kinase from the hyperthermophilic archaeon Methanococcus jannaschii : overexpression, crystallization and preliminary X-ray crystallographic analysis”
Min, K., Song, H. K., Chang, C., Lee, J. Y., Eom, S. H., Kim, K. K., Yu, Y. G. & Suh, S. W. (2000)
Acta Crystallogr. D56, 1485-1487. (International Union of Crystallogrphy)
(30) “Crystal structure of Escherichia coli CyaY protein reveals a previously unidentified fold for the evolutionarily conserved frataxin family”
Cho, S.-J., Lee, M. G., Yang, J. K., Lee, J. Y., Song, H. K. & Suh, S. W. (2000)
Proc Natl Acad Sci USA. 97, 8932-8937. (National Academy of Sciences, USA)
(29) “Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli CyaY, a structural homologue of human frataxin”
Lee, M. G., Cho, S.-J., Yang, J. K. Song, H. K. & Suh, S. W. (2000)
Acta Crystallogr. D56, 920-921. (International Union of Crystallography)
(28) “Crystallization and preliminary X-ray crystallographic analysis of Saccharomyces cerevisiae Ygr203p, a homologue of Acr2 arsenate reductase”
Moon, J., Kim, Y. S., Lee, J. Y., Cho, S.-J., Song, H. K., Cho, J. H., Kim, B. M., Kim, K. K. & Suh, S. W. (2000)
Acta Crystallogr. D56, 778-780. (International Union of Crystallography)
(27) “The structures of HslU and the ATP-dependent protease HslU-HslV”
Bochtler, M., Hartmann, C., Song, H. K., Bourenkov, G. P., Bartunik, H. D. & Huber, R. (2000)
Nature 403, 800-805. (Nature Publishing Group)
(26) “Crystallization and preliminary X-ray crystallographic analysis of human nucleoside diphosphate kinase A”
Min, K., Kim, S. Y., Song, H. K., Chang, C., Cho, S.-J., Moon, J., Yang, J. K., Lee, J. Y., Lee, K.-J. & Suh, S. W. (2000)
Acta Crystallogr. D56, 504-505. (International Union of Crystallography)
(25) “Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications”
Lee, J. Y., Chang, C, Song, H. K., Moon, J., Yang, J. K., Kim, H. K., Kwon, S. T. & Suh, S. W. (2000)
EMBO J. 19, 1119-1129. (European Molecular Biology Oranization)
1999
(24) “Crystal structure of a 16 kDa double-headed Bowman-Birk trypsin inhibitor from barley seeds at 1.9 A resolution”
Song, H. K., Kim, Y. S., Yang, J. K., Moon, J. H., Lee, J. Y. & Suh, S. W. (1999)
J. Mol. Biol. 293, 1133-1144. (Academic Press)
[Cover Illustration of Nov. 12th Issue]
(23) “Insights into eukaryotic multistep phosphorelay signal transduction revealed by the crystal structure of Ypd1p from Saccharomyces cerevisiae”
Song, H. K., Lee, J. Y., Lee, M. G., Moon, J. H., Min, K.S., Yang, J. K. & Suh, S. W. (1999)
J. Mol. Biol. 293, 753-761. (Academic Press)
[Cover Illustration of Nov. 5th Issue]
(22) “Crystallization and preliminary X-ray analysis of a complex between the Bowman-Birk trypsin inhibitor from barley and porcine pancreatic trypsin”
Kim, Y. S., Song, H. K. & Suh, S. W. (1999)
Acta Crystallogr. D55, 1244-1246. (International Union of Crystallography)
(21) “Crystallization and preliminary X-ray analysis of Saccharomyces cerevisiae Ypd1p, a key intermediate in phosphorelay signal transduction”
Lee, M. G., Lee, J. Y., Song, H. K. & Suh, S. W. (1999)
Acta Crystallogr. D55, 1219-1221. (International Union of Crystallography)
(20) “Crystallization and preliminary X-ray crystallographic analysis of the protease inhibitor ecotin in complex with chymotrypsin”
Lee, C. S., Seong, I. S., Song, H. K., Chung, C. H. & Suh, S. W. (1999)
Acta Crystallogr. D55, 1091-1092. (International Union of Crystallography)
(19) “Crystal structure of deoxycytidylate hydroxymethylase from bacteriophage T4, a component of the deoxyribonucleoside triphosphate-synthesizing complex”
Song, H. K., Sohn, S. H. & Suh. S. W. (1999)
EMBO J. 18, 1104-1113. (European Molecular Biology Organization)
(18) “Crystallization and preliminary X-ray crystallographic analysis of deoxycytidylate hydroxymethylase from bacteriophage T4”
Sohn, S. H., Song, H. K., Min, K. S., Cho, S. -J., Moon, J., Lee, J. Y., Ahn, H. J., Chang, C., Kim, H. J. & Suh, S. W. (1999)
Acta Crystallogr. D55, 1061-1063. (International Union of Crystallography)
(17) “A thermostable xylose isomerase from Thermus caldophilus : biochemical characterization, crystallization, and preliminary X-ray analysis”
Chang, C., Song, H. K., Park, B. C., Lee, D. S. & Suh, S. W. (1999)
Acta Crystallogr. D55, 294-296. (International Union of Crystallography)
1998
(16) “Preliminary X-ray crystallographic analysis of Bowman-Birk trypsin inhibitor from barley seeds”
Song, H. K. & Suh, S. W. (1998)
Acta Crystallogr. D54, 441-443. (International Union of Crystallography)
(15) “Internet and the progress of structural biology”
Song, H. K. (1998)
Biochemistry News 18, 16-17. (Korean Biochemical Society)
(14) “Kunitz-type soybean trypsin inhibitor revisited: Refined structure of its complex with porcine trypsin reveals an insight into the interaction between a homologous inhibitor from Erythrina caffra and tissue-type plasminogen activator”
Song, H. K. & Suh, S. W. (1998)
J. Mol. Biol. 275, 347-363. (Academic Press)
1997
(13) “Crystal structure of carboxylesterase from Pseudomonas fluorescens, an alpha/beta hydrolase with broad substrate specificity”
Kim, K. K., Song, H. K., Shin, D. H., Hwang, K. Y., Choe, S., Yoo, O. & Suh, S. W. (1997)
Structure 5, 1571-1584. (Current Biology Ltd)
(12) “Crystal structure of thermostable alpha-amylase from Bacillus licheniformis at 1.7 A resolution”
Hwang, K. Y., Song, H. K., Chang, C., Lee, J., Lee, S. Y., Kim, K. K., Choe, S., Sweet, R. M. & Suh, S. W. (1997)
Mol. Cells 7, 251-258. (Korean Soc. of Mol. Biol.)
(11) “The crystal structure of a triacylglycerol lipase from Pseudomonas cepacia reveals a highly open conformation in the absence of a bound inhibitor”
Kim, K. K., Song, H. K., Shin, D. H., Hwang, K. Y. & Suh, S. W. (1997)
Structure 5, 173-185. (Current Biology Ltd)
1996
(10) “Crystal structure analyses of uncomplexed ecotin in two crystal forms: Implications for its function and stability”
Shin, D. H., Song, H. K., Seong, I. S., Lee, C. S., Chung, C. H. & Suh, S. W. (1996)
Protein Sci. 5, 2236-2247. (Protein Society)
(9) “Crystal structure of Bacillus licheniformis alpha-amylase at 1.7 A resolution”
Song, H. K., Hwang, K. Y., Chang, C. & Suh, S. W. (1996)
Enzymes for Carbohydrate Engineering (in Prog. Biotechnol.) 12, 163-168. (Elsevier Science)
(8) “Refined structure of the chitinase from barley seeds at 2.0 A resolution”
Song, H. K. & Suh, S. W. (1996)
Acta Crystallogr. D56, 289-298. (International Union of Crystallography)
1995
(7) “Crystal structure of an uncleaved alpha1-antitrypsin reveals the conformation of its inhibitory reactive loop”
Song, H. K., Lee, K. N., Kwon, K. S., Yu, M. H. & Suh, S. W. (1995)
FEBS Lett. 377, 150-154. (Federation of European Biochemical Societies)
(6) “Crystallization and preliminary X-ray crystallographic analysis of DNA polymerase from Thermus aquaticus”
Eom, S. H., Song, H. K., Suh, S. W., Kim, Y. S., Steitz, T. A., Park, J. H., Kim, J. S., Kwon, S. T. & Lee, D. S. (1995)
Acta Crystallogr. D51, 1086-1088. (International Union of Crystallography)
(5) “Crystallization, molecular replacement solution, and refinement of tetrameric beta-amylase from sweet potato”
Cheom, C. G., Eom, S. H., Chang, C., Shin, D. H., Song, H. K., Min, K. S. & Suh, S. W. (1995)
Proteins 21, 105-117. (Wiley-Liss, Inc.)
1994
(4) “Crystallization and preliminary X-ray crystallographic study of ribosome inactivating protein from barley seeds”
Song, H. K., Hwang, K. Y., Kim, K. K. & Suh, S. W. (1994)
Acta Crystallogr. D50, 910-912. (International Union of Crystallography)
(3) “Crystallization of Escherichia coli IciA Protein, An Inhibitor of Initiation of Chromosomal Replication”
Song, H. K., Cha, H., Yoo, S. J., Chung, C. H., Hwang, D. S. & Suh, S. W. (1994)
Korean J. Cryst. 5, 20-23. (Korean Soc. of Crystallogr. & Crystal Growth)
1993
(2) “Crystallization and Preliminary X-ray Crystallographic Study of Kunitz-type Soybean Trypsin Inhibitor”
Lee, J. K., Song, H. K., Hwang, K. Y., Kim, K. K. & Suh, S. W. (1993)
Mol. Cells 3, 335-337. (Korean Soc. of Mol. Biol.)
(1) “Crystallization and preliminary X-ray crystallographic analysis of chitinase from barley seeds”
Song, H. K., Hwang, K. Y., Kim, K. K. & Suh, S. W. (1993)
Proteins 17, 107-109. (Wiley-Liss, Inc.)